The KOG genome analysis system complies with the following security guidelines and can be used as a server outside NBDC institution, a third-case computer.
It consists of three main components: computer, high-speed storage, and archive storage. Specifications are as follows:
1. Computation node: Approximately 2000 cores in totalnodes | OS | CPU | CPU cores (per node) |
Memory (per node) |
|
Computation node | 25 | CentOS 8 | AMD EPYC 7742(2.25GHz) x1 | 64 | 512GB |
---|---|---|---|---|---|
Computation node (Large memory) |
2 | CentOS 8 | AMD EPYC 7742(2.25GHz) x2 | 128 | 4096GB |
Total | |
Lustre | 2.3PB |
---|
Tape Drive | Capacity | |
Quantum Scalar i6 LTO8 Tape Library | 2 | 6PB |
---|
Name | |
Computational network | 100Gbps EDR InfiniBand |
---|---|
Management network | 10Gbps Ethernet |
Queue name | Number of slots (Queue) |
Number of slots (per node) |
Memory (Queue) |
Memory (per node) |
Maximum execution time |
lmem.q(Large memory job) | 256 slot | 128 slot | 8 TB | 4 TB | 31 days |
---|---|---|---|---|---|
node.q(Normal job) | 1200 slot | 64 slot | 10.2 TB | 512 GB | 31 days |
qlogin.q(Dialogue job) | 128 slot | 64 slot | 1 TB | 512 GB | Unlimited (Automatic logout in 6hours without operation) |